| bioimageio/core/__init__.py |
(no function) |
24 |
0 |
0 |
100% |
| bioimageio/core/__main__.py |
main |
2 |
0 |
0 |
100% |
| bioimageio/core/__main__.py |
(no function) |
4 |
1 |
0 |
75% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin._binary_op |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__add__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__sub__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__mul__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__pow__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__truediv__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__floordiv__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__mod__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__and__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__xor__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__or__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__lshift__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rshift__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__lt__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__le__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__gt__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__ge__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__eq__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__ne__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__radd__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rsub__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rmul__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rpow__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rtruediv__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rfloordiv__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rmod__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rand__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__rxor__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__ror__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin._inplace_binary_op |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__iadd__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__isub__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__imul__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__ipow__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__itruediv__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__ifloordiv__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__imod__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__iand__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__ixor__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__ior__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__ilshift__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__irshift__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin._unary_op |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__neg__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__pos__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__abs__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.__invert__ |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.round |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.argsort |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.conj |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
MagicTensorOpsMixin.conjugate |
1 |
1 |
0 |
0% |
| bioimageio/core/_magic_tensor_ops.py |
(no function) |
103 |
0 |
0 |
100% |
| bioimageio/core/_op_base.py |
Operator.__call__ |
1 |
0 |
0 |
100% |
| bioimageio/core/_op_base.py |
Operator.required_measures |
1 |
0 |
0 |
100% |
| bioimageio/core/_op_base.py |
BlockedOperator.__call__ |
0 |
0 |
0 |
100% |
| bioimageio/core/_op_base.py |
BlockedOperator.required_measures |
1 |
0 |
0 |
100% |
| bioimageio/core/_op_base.py |
(no function) |
16 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.__init__ |
22 |
2 |
0 |
91% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.__enter__ |
2 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.__exit__ |
2 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.predict_sample_block |
11 |
2 |
0 |
82% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.predict_sample_without_blocking |
6 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.get_output_sample_id |
2 |
2 |
0 |
0% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.predict_sample_with_fixed_blocking |
12 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.predict_sample_with_blocking |
7 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.apply_preprocessing |
2 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.apply_postprocessing |
6 |
3 |
0 |
50% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.load |
1 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
PredictionPipeline.unload |
1 |
0 |
0 |
100% |
| bioimageio/core/_prediction_pipeline.py |
create_prediction_pipeline |
11 |
1 |
0 |
91% |
| bioimageio/core/_prediction_pipeline.py |
create_prediction_pipeline.dataset |
5 |
3 |
0 |
40% |
| bioimageio/core/_prediction_pipeline.py |
(no function) |
32 |
0 |
1 |
100% |
| bioimageio/core/_resource_tests.py |
enable_determinism |
39 |
16 |
0 |
59% |
| bioimageio/core/_resource_tests.py |
test_model |
1 |
0 |
0 |
100% |
| bioimageio/core/_resource_tests.py |
default_run_command |
2 |
2 |
0 |
0% |
| bioimageio/core/_resource_tests.py |
test_description |
15 |
12 |
1 |
20% |
| bioimageio/core/_resource_tests.py |
_test_in_env |
62 |
62 |
1 |
0% |
| bioimageio/core/_resource_tests.py |
load_description_and_test |
0 |
0 |
0 |
100% |
| bioimageio/core/_resource_tests.py |
load_description_and_test |
0 |
0 |
0 |
100% |
| bioimageio/core/_resource_tests.py |
load_description_and_test |
33 |
2 |
0 |
94% |
| bioimageio/core/_resource_tests.py |
_get_tolerance |
23 |
4 |
0 |
83% |
| bioimageio/core/_resource_tests.py |
_test_model_inference |
49 |
26 |
0 |
47% |
| bioimageio/core/_resource_tests.py |
_test_model_inference.add_error_entry |
1 |
1 |
0 |
0% |
| bioimageio/core/_resource_tests.py |
_test_model_inference.add_warning_entry |
1 |
1 |
0 |
0% |
| bioimageio/core/_resource_tests.py |
_test_model_inference_parametrized |
42 |
13 |
0 |
69% |
| bioimageio/core/_resource_tests.py |
_test_model_inference_parametrized.generate_test_cases |
11 |
1 |
0 |
91% |
| bioimageio/core/_resource_tests.py |
_test_model_inference_parametrized.generate_test_cases.get_ns |
1 |
0 |
0 |
100% |
| bioimageio/core/_resource_tests.py |
_test_expected_resource_type |
2 |
0 |
0 |
100% |
| bioimageio/core/_resource_tests.py |
(no function) |
48 |
0 |
0 |
100% |
| bioimageio/core/_settings.py |
(no function) |
8 |
0 |
0 |
100% |
| bioimageio/core/axis.py |
_guess_axis_type |
11 |
3 |
0 |
73% |
| bioimageio/core/axis.py |
Axis.__post_init__ |
4 |
0 |
0 |
100% |
| bioimageio/core/axis.py |
Axis.create |
8 |
2 |
1 |
75% |
| bioimageio/core/axis.py |
AxisInfo.create |
19 |
12 |
1 |
37% |
| bioimageio/core/axis.py |
(no function) |
26 |
0 |
0 |
100% |
| bioimageio/core/backends/__init__.py |
(no function) |
2 |
0 |
0 |
100% |
| bioimageio/core/backends/_model_adapter.py |
ModelAdapter.__init__ |
9 |
0 |
0 |
100% |
| bioimageio/core/backends/_model_adapter.py |
ModelAdapter.create |
55 |
22 |
1 |
60% |
| bioimageio/core/backends/_model_adapter.py |
ModelAdapter.load |
1 |
1 |
0 |
0% |
| bioimageio/core/backends/_model_adapter.py |
ModelAdapter.forward |
8 |
1 |
0 |
88% |
| bioimageio/core/backends/_model_adapter.py |
ModelAdapter._forward_impl |
0 |
0 |
0 |
100% |
| bioimageio/core/backends/_model_adapter.py |
ModelAdapter.unload |
0 |
0 |
0 |
100% |
| bioimageio/core/backends/_model_adapter.py |
ModelAdapter._get_input_args_numpy |
0 |
0 |
0 |
100% |
| bioimageio/core/backends/_model_adapter.py |
(no function) |
26 |
0 |
0 |
100% |
| bioimageio/core/backends/keras_backend.py |
KerasModelAdapter.__init__ |
22 |
6 |
0 |
73% |
| bioimageio/core/backends/keras_backend.py |
KerasModelAdapter._forward_impl |
4 |
1 |
0 |
75% |
| bioimageio/core/backends/keras_backend.py |
KerasModelAdapter.unload |
1 |
0 |
0 |
100% |
| bioimageio/core/backends/keras_backend.py |
(no function) |
27 |
3 |
0 |
89% |
| bioimageio/core/backends/onnx_backend.py |
ONNXModelAdapter.__init__ |
9 |
2 |
0 |
78% |
| bioimageio/core/backends/onnx_backend.py |
ONNXModelAdapter._forward_impl |
5 |
1 |
0 |
80% |
| bioimageio/core/backends/onnx_backend.py |
ONNXModelAdapter.unload |
1 |
0 |
0 |
100% |
| bioimageio/core/backends/onnx_backend.py |
(no function) |
11 |
0 |
0 |
100% |
| bioimageio/core/backends/pytorch_backend.py |
PytorchModelAdapter.__init__ |
12 |
3 |
1 |
75% |
| bioimageio/core/backends/pytorch_backend.py |
PytorchModelAdapter._forward_impl |
21 |
6 |
1 |
71% |
| bioimageio/core/backends/pytorch_backend.py |
PytorchModelAdapter.unload |
4 |
0 |
0 |
100% |
| bioimageio/core/backends/pytorch_backend.py |
load_torch_model |
14 |
4 |
0 |
71% |
| bioimageio/core/backends/pytorch_backend.py |
load_torch_state_dict |
17 |
4 |
0 |
76% |
| bioimageio/core/backends/pytorch_backend.py |
get_devices |
7 |
2 |
0 |
71% |
| bioimageio/core/backends/pytorch_backend.py |
(no function) |
25 |
0 |
0 |
100% |
| bioimageio/core/backends/tensorflow_backend.py |
TensorflowModelAdapter.__init__ |
8 |
8 |
0 |
0% |
| bioimageio/core/backends/tensorflow_backend.py |
TensorflowModelAdapter._forward_impl |
14 |
14 |
0 |
0% |
| bioimageio/core/backends/tensorflow_backend.py |
TensorflowModelAdapter.unload |
1 |
1 |
0 |
0% |
| bioimageio/core/backends/tensorflow_backend.py |
KerasModelAdapter.__init__ |
14 |
5 |
0 |
64% |
| bioimageio/core/backends/tensorflow_backend.py |
KerasModelAdapter._forward_impl |
6 |
0 |
0 |
100% |
| bioimageio/core/backends/tensorflow_backend.py |
KerasModelAdapter.unload |
1 |
0 |
0 |
100% |
| bioimageio/core/backends/tensorflow_backend.py |
create_tf_model_adapter |
14 |
4 |
0 |
71% |
| bioimageio/core/backends/tensorflow_backend.py |
(no function) |
19 |
0 |
0 |
100% |
| bioimageio/core/backends/torchscript_backend.py |
TorchscriptModelAdapter.__init__ |
12 |
3 |
0 |
75% |
| bioimageio/core/backends/torchscript_backend.py |
TorchscriptModelAdapter._forward_impl |
7 |
0 |
0 |
100% |
| bioimageio/core/backends/torchscript_backend.py |
TorchscriptModelAdapter.unload |
4 |
0 |
0 |
100% |
| bioimageio/core/backends/torchscript_backend.py |
(no function) |
12 |
0 |
0 |
100% |
| bioimageio/core/block.py |
Block.inner_data |
1 |
0 |
0 |
100% |
| bioimageio/core/block.py |
Block.__post_init__ |
6 |
0 |
0 |
100% |
| bioimageio/core/block.py |
Block.from_sample_member |
1 |
0 |
0 |
100% |
| bioimageio/core/block.py |
Block.get_transformed |
1 |
1 |
0 |
0% |
| bioimageio/core/block.py |
Block.from_meta |
1 |
0 |
0 |
100% |
| bioimageio/core/block.py |
split_tensor_into_blocks |
2 |
2 |
0 |
0% |
| bioimageio/core/block.py |
_block_generator |
2 |
2 |
0 |
0% |
| bioimageio/core/block.py |
(no function) |
21 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
LinearAxisTransform.compute |
1 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
BlockMeta.shape |
1 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
BlockMeta.padding |
1 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
BlockMeta.outer_slice |
1 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
BlockMeta.inner_shape |
1 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
BlockMeta.local_slice |
1 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
BlockMeta.dims |
1 |
1 |
0 |
0% |
| bioimageio/core/block_meta.py |
BlockMeta.tagged_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/block_meta.py |
BlockMeta.inner_slice_wo_overlap |
1 |
1 |
0 |
0% |
| bioimageio/core/block_meta.py |
BlockMeta.__post_init__ |
10 |
1 |
0 |
90% |
| bioimageio/core/block_meta.py |
BlockMeta.get_transformed |
1 |
1 |
0 |
0% |
| bioimageio/core/block_meta.py |
split_shape_into_blocks |
15 |
1 |
0 |
93% |
| bioimageio/core/block_meta.py |
_block_meta_generator |
5 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
split_multiple_shapes_into_blocks |
27 |
8 |
0 |
70% |
| bioimageio/core/block_meta.py |
_aligned_blocks_generator |
3 |
0 |
0 |
100% |
| bioimageio/core/block_meta.py |
_repeat_single_block |
6 |
6 |
0 |
0% |
| bioimageio/core/block_meta.py |
(no function) |
50 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
WithSummaryLogging.log |
1 |
1 |
0 |
0% |
| bioimageio/core/cli.py |
WithSource.descr |
1 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
WithSource.descr_id |
6 |
1 |
0 |
83% |
| bioimageio/core/cli.py |
ValidateFormatCmd.descr |
1 |
1 |
0 |
0% |
| bioimageio/core/cli.py |
ValidateFormatCmd.run |
2 |
2 |
0 |
0% |
| bioimageio/core/cli.py |
TestCmd.run |
1 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
PackageCmd.run |
4 |
2 |
0 |
50% |
| bioimageio/core/cli.py |
_get_stat |
17 |
14 |
0 |
18% |
| bioimageio/core/cli.py |
UpdateCmdBase.updated |
1 |
1 |
0 |
0% |
| bioimageio/core/cli.py |
UpdateCmdBase.run |
23 |
3 |
1 |
87% |
| bioimageio/core/cli.py |
UpdateFormatCmd.updated |
1 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
UpdateHashesCmd.updated |
1 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
PredictCmd._example |
39 |
6 |
0 |
85% |
| bioimageio/core/cli.py |
PredictCmd._example.get_example_command |
2 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
PredictCmd.run |
32 |
4 |
0 |
88% |
| bioimageio/core/cli.py |
PredictCmd.run.expand_inputs |
13 |
7 |
0 |
46% |
| bioimageio/core/cli.py |
PredictCmd.run.expand_outputs |
9 |
3 |
0 |
67% |
| bioimageio/core/cli.py |
PredictCmd.run.input_dataset |
2 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
AddWeightsCmd.run |
7 |
2 |
0 |
71% |
| bioimageio/core/cli.py |
Bioimageio.settings_customise_sources |
4 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
Bioimageio._log |
2 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
Bioimageio.run |
4 |
0 |
0 |
100% |
| bioimageio/core/cli.py |
_get_sample_ids |
10 |
2 |
0 |
80% |
| bioimageio/core/cli.py |
_get_sample_ids.get_common_seq |
13 |
7 |
0 |
46% |
| bioimageio/core/cli.py |
_get_sample_ids.get_shorter_diff |
14 |
6 |
0 |
57% |
| bioimageio/core/cli.py |
(no function) |
158 |
0 |
0 |
100% |
| bioimageio/core/commands.py |
test |
5 |
1 |
0 |
80% |
| bioimageio/core/commands.py |
validate_format |
2 |
0 |
0 |
100% |
| bioimageio/core/commands.py |
package |
13 |
6 |
0 |
54% |
| bioimageio/core/commands.py |
(no function) |
12 |
0 |
0 |
100% |
| bioimageio/core/common.py |
_LeftRight.create |
6 |
0 |
1 |
100% |
| bioimageio/core/common.py |
(no function) |
46 |
0 |
0 |
100% |
| bioimageio/core/dataset.py |
(no function) |
3 |
0 |
0 |
100% |
| bioimageio/core/digest_spec.py |
import_callable |
13 |
5 |
1 |
62% |
| bioimageio/core/digest_spec.py |
_import_from_file_impl |
37 |
12 |
0 |
68% |
| bioimageio/core/digest_spec.py |
get_axes_infos |
7 |
0 |
0 |
100% |
| bioimageio/core/digest_spec.py |
get_member_id |
4 |
0 |
1 |
100% |
| bioimageio/core/digest_spec.py |
get_member_ids |
1 |
0 |
0 |
100% |
| bioimageio/core/digest_spec.py |
get_test_inputs |
6 |
0 |
0 |
100% |
| bioimageio/core/digest_spec.py |
get_test_outputs |
6 |
0 |
0 |
100% |
| bioimageio/core/digest_spec.py |
get_input_halo |
16 |
1 |
0 |
94% |
| bioimageio/core/digest_spec.py |
get_block_transform |
27 |
2 |
1 |
93% |
| bioimageio/core/digest_spec.py |
get_io_sample_block_metas |
9 |
1 |
0 |
89% |
| bioimageio/core/digest_spec.py |
get_tensor |
7 |
2 |
0 |
71% |
| bioimageio/core/digest_spec.py |
create_sample_for_model |
11 |
5 |
0 |
55% |
| bioimageio/core/digest_spec.py |
load_sample_for_model |
16 |
2 |
0 |
88% |
| bioimageio/core/digest_spec.py |
(no function) |
44 |
0 |
0 |
100% |
| bioimageio/core/io.py |
load_image |
32 |
9 |
1 |
72% |
| bioimageio/core/io.py |
load_tensor |
2 |
0 |
0 |
100% |
| bioimageio/core/io.py |
_split_dataset_path |
17 |
9 |
0 |
47% |
| bioimageio/core/io.py |
_split_dataset_path.separate_pure_path |
4 |
0 |
0 |
100% |
| bioimageio/core/io.py |
save_tensor |
21 |
3 |
0 |
86% |
| bioimageio/core/io.py |
save_sample |
8 |
1 |
0 |
88% |
| bioimageio/core/io.py |
save_dataset_stat |
2 |
2 |
0 |
0% |
| bioimageio/core/io.py |
load_dataset_stat |
2 |
2 |
0 |
0% |
| bioimageio/core/io.py |
ensure_unzipped |
13 |
4 |
0 |
69% |
| bioimageio/core/io.py |
get_suffix |
12 |
12 |
1 |
0% |
| bioimageio/core/io.py |
(no function) |
38 |
0 |
0 |
100% |
| bioimageio/core/model_adapters.py |
get_weight_formats |
1 |
1 |
0 |
0% |
| bioimageio/core/model_adapters.py |
(no function) |
4 |
0 |
0 |
100% |
| bioimageio/core/prediction.py |
predict |
25 |
6 |
0 |
76% |
| bioimageio/core/prediction.py |
predict_many |
16 |
16 |
0 |
0% |
| bioimageio/core/prediction.py |
(no function) |
16 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
_convert_axis_ids |
8 |
3 |
1 |
62% |
| bioimageio/core/proc_ops.py |
_SimpleOperator.required_measures |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
_SimpleOperator.get_output_shape |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
_SimpleOperator.__call__ |
11 |
4 |
1 |
64% |
| bioimageio/core/proc_ops.py |
_SimpleOperator._apply |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
AddKnownDatasetStats.required_measures |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
AddKnownDatasetStats.__call__ |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
UpdateStats.required_measures |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
UpdateStats.__post_init__ |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
UpdateStats.__call__ |
8 |
4 |
0 |
50% |
| bioimageio/core/proc_ops.py |
Binarize._apply |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
Binarize.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
Binarize.from_proc_descr |
4 |
4 |
1 |
0% |
| bioimageio/core/proc_ops.py |
Clip.__post_init__ |
2 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
Clip._apply |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
Clip.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
Clip.from_proc_descr |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
EnsureDtype.from_proc_descr |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
EnsureDtype.get_descr |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
EnsureDtype.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
EnsureDtype._apply |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ScaleLinear._apply |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ScaleLinear.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
ScaleLinear.from_proc_descr |
17 |
4 |
1 |
76% |
| bioimageio/core/proc_ops.py |
ScaleMeanVariance.required_measures |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ScaleMeanVariance.__post_init__ |
11 |
2 |
0 |
82% |
| bioimageio/core/proc_ops.py |
ScaleMeanVariance._apply |
5 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ScaleMeanVariance.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
ScaleMeanVariance.from_proc_descr |
3 |
3 |
0 |
0% |
| bioimageio/core/proc_ops.py |
_get_axes |
8 |
1 |
1 |
88% |
| bioimageio/core/proc_ops.py |
ScaleRange.__post_init__ |
10 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ScaleRange.required_measures |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ScaleRange.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
ScaleRange.from_proc_descr |
7 |
1 |
0 |
86% |
| bioimageio/core/proc_ops.py |
ScaleRange._apply |
3 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ScaleRange.get_descr |
3 |
3 |
0 |
0% |
| bioimageio/core/proc_ops.py |
Sigmoid._apply |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
Sigmoid.required_measures |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
Sigmoid.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
Sigmoid.from_proc_descr |
2 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
Sigmoid.get_descr |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
ZeroMeanUnitVariance.__post_init__ |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ZeroMeanUnitVariance.required_measures |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ZeroMeanUnitVariance.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
ZeroMeanUnitVariance.from_proc_descr |
7 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ZeroMeanUnitVariance._apply |
3 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
ZeroMeanUnitVariance.get_descr |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
FixedZeroMeanUnitVariance.__post_init__ |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
FixedZeroMeanUnitVariance.get_output_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/proc_ops.py |
FixedZeroMeanUnitVariance.from_proc_descr |
5 |
1 |
1 |
80% |
| bioimageio/core/proc_ops.py |
FixedZeroMeanUnitVariance.get_descr |
7 |
7 |
0 |
0% |
| bioimageio/core/proc_ops.py |
FixedZeroMeanUnitVariance._apply |
1 |
0 |
0 |
100% |
| bioimageio/core/proc_ops.py |
get_proc |
25 |
8 |
1 |
68% |
| bioimageio/core/proc_ops.py |
(no function) |
150 |
0 |
0 |
100% |
| bioimageio/core/proc_setup.py |
_ApplyProcs.__init__ |
2 |
0 |
0 |
100% |
| bioimageio/core/proc_setup.py |
_ApplyProcs.__call__ |
2 |
0 |
0 |
100% |
| bioimageio/core/proc_setup.py |
get_pre_and_postprocessing |
2 |
0 |
0 |
100% |
| bioimageio/core/proc_setup.py |
setup_pre_and_postprocessing |
15 |
3 |
0 |
80% |
| bioimageio/core/proc_setup.py |
get_requried_measures |
2 |
2 |
0 |
0% |
| bioimageio/core/proc_setup.py |
get_required_dataset_measures |
2 |
0 |
0 |
100% |
| bioimageio/core/proc_setup.py |
get_requried_sample_measures |
2 |
2 |
0 |
0% |
| bioimageio/core/proc_setup.py |
_prepare_procs |
18 |
0 |
1 |
100% |
| bioimageio/core/proc_setup.py |
_prepare_setup_pre_and_postprocessing |
7 |
0 |
1 |
100% |
| bioimageio/core/proc_setup.py |
(no function) |
39 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
Sample.shape |
1 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
Sample.as_arrays |
1 |
1 |
0 |
0% |
| bioimageio/core/sample.py |
Sample.split_into_blocks |
4 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
Sample.as_single_block |
3 |
3 |
0 |
0% |
| bioimageio/core/sample.py |
Sample.from_blocks |
14 |
1 |
0 |
93% |
| bioimageio/core/sample.py |
SampleBlockBase.shape |
1 |
1 |
0 |
0% |
| bioimageio/core/sample.py |
SampleBlockBase.inner_shape |
1 |
1 |
0 |
0% |
| bioimageio/core/sample.py |
SampleBlockMeta.get_transformed |
9 |
1 |
0 |
89% |
| bioimageio/core/sample.py |
SampleBlockMeta.get_transformed.get_member_halo |
1 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
SampleBlockMeta.with_data |
1 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
SampleBlock.members |
1 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
SampleBlock.get_transformed_meta |
1 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
_ConsolidatedMemberBlocks.__init__ |
7 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
sample_block_meta_generator |
3 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
sample_block_generator |
3 |
0 |
0 |
100% |
| bioimageio/core/sample.py |
(no function) |
67 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
MeanCalculator.__init__ |
7 |
7 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
MeanCalculator.compute |
1 |
1 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
MeanCalculator._compute_impl |
2 |
2 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
MeanCalculator.update |
2 |
2 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
MeanCalculator.compute_and_update |
3 |
3 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
MeanCalculator._update_impl |
12 |
12 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
MeanCalculator.finalize |
3 |
3 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
MeanVarStdCalculator.__init__ |
6 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
MeanVarStdCalculator.compute |
13 |
1 |
0 |
92% |
| bioimageio/core/stat_calculators.py |
MeanVarStdCalculator.update |
22 |
1 |
0 |
95% |
| bioimageio/core/stat_calculators.py |
MeanVarStdCalculator.finalize |
9 |
1 |
0 |
89% |
| bioimageio/core/stat_calculators.py |
SamplePercentilesCalculator.__init__ |
5 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
SamplePercentilesCalculator.compute |
3 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
MeanPercentilesCalculator.__init__ |
7 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
MeanPercentilesCalculator.update |
9 |
2 |
0 |
78% |
| bioimageio/core/stat_calculators.py |
MeanPercentilesCalculator.finalize |
4 |
1 |
0 |
75% |
| bioimageio/core/stat_calculators.py |
CrickPercentilesCalculator.__init__ |
11 |
11 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
CrickPercentilesCalculator._initialize |
11 |
11 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
CrickPercentilesCalculator.update |
9 |
9 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
CrickPercentilesCalculator.finalize |
6 |
6 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
NaiveSampleMeasureCalculator.__init__ |
3 |
3 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
NaiveSampleMeasureCalculator.compute |
1 |
1 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
StatsCalculator.__init__ |
10 |
5 |
0 |
50% |
| bioimageio/core/stat_calculators.py |
StatsCalculator.has_dataset_measures |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
StatsCalculator.update |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
StatsCalculator.finalize |
6 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
StatsCalculator.update_and_get_all |
4 |
1 |
0 |
75% |
| bioimageio/core/stat_calculators.py |
StatsCalculator.skip_update_and_get_all |
1 |
1 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
StatsCalculator._compute |
5 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
StatsCalculator._update |
9 |
0 |
0 |
100% |
| bioimageio/core/stat_calculators.py |
get_measure_calculators |
40 |
2 |
1 |
95% |
| bioimageio/core/stat_calculators.py |
compute_dataset_measures |
9 |
9 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
compute_sample_measures |
6 |
6 |
0 |
0% |
| bioimageio/core/stat_calculators.py |
compute_measures |
13 |
1 |
0 |
92% |
| bioimageio/core/stat_calculators.py |
(no function) |
73 |
4 |
0 |
95% |
| bioimageio/core/stat_measures.py |
tensor_custom_before_validator |
3 |
3 |
0 |
0% |
| bioimageio/core/stat_measures.py |
tensor_custom_serializer |
1 |
1 |
0 |
0% |
| bioimageio/core/stat_measures.py |
SampleLike.members |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
SampleMeasureBase.compute |
1 |
1 |
0 |
0% |
| bioimageio/core/stat_measures.py |
SampleMean.compute |
2 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
SampleMean.model_post_init |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
DatasetMean.model_post_init |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
SampleStd.compute |
2 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
SampleStd.model_post_init |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
DatasetStd.model_post_init |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
SampleVar.compute |
2 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
SampleVar.model_post_init |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
DatasetVar.model_post_init |
1 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
_Quantile.model_post_init |
2 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
SampleQuantile.compute |
2 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
SampleQuantile.model_post_init |
2 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
DatasetPercentile.model_post_init |
2 |
0 |
0 |
100% |
| bioimageio/core/stat_measures.py |
(no function) |
72 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.__init__ |
3 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.__array__ |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.__getitem__ |
7 |
2 |
0 |
71% |
| bioimageio/core/tensor.py |
Tensor.__setitem__ |
8 |
2 |
0 |
75% |
| bioimageio/core/tensor.py |
Tensor.__len__ |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor._iter |
2 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.__iter__ |
3 |
1 |
0 |
67% |
| bioimageio/core/tensor.py |
Tensor._binary_op |
2 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor._inplace_binary_op |
2 |
2 |
0 |
0% |
| bioimageio/core/tensor.py |
Tensor._unary_op |
2 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.from_xarray |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.from_numpy |
10 |
2 |
0 |
80% |
| bioimageio/core/tensor.py |
Tensor.data |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.dims |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.dtype |
3 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.ndim |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.shape |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.shape_tuple |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.size |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.sizes |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.tagged_shape |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.argmax |
3 |
3 |
0 |
0% |
| bioimageio/core/tensor.py |
Tensor.astype |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.clip |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.crop_to |
19 |
5 |
1 |
74% |
| bioimageio/core/tensor.py |
Tensor.expand_dims |
1 |
1 |
0 |
0% |
| bioimageio/core/tensor.py |
Tensor.item |
5 |
1 |
0 |
80% |
| bioimageio/core/tensor.py |
Tensor.mean |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.pad |
2 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.pad_to |
21 |
6 |
1 |
71% |
| bioimageio/core/tensor.py |
Tensor.quantile |
4 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.resize_to |
19 |
1 |
0 |
95% |
| bioimageio/core/tensor.py |
Tensor.std |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.sum |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.transpose |
5 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor.var |
1 |
0 |
0 |
100% |
| bioimageio/core/tensor.py |
Tensor._interprete_array_wo_known_axes |
13 |
3 |
0 |
77% |
| bioimageio/core/tensor.py |
_add_singletons |
12 |
5 |
0 |
58% |
| bioimageio/core/tensor.py |
_get_array_view |
12 |
3 |
0 |
75% |
| bioimageio/core/tensor.py |
(no function) |
67 |
0 |
2 |
100% |
| bioimageio/core/utils/__init__.py |
files |
2 |
2 |
0 |
0% |
| bioimageio/core/utils/__init__.py |
(no function) |
10 |
1 |
0 |
90% |
| bioimageio/core/utils/_compare.py |
compare |
5 |
1 |
1 |
80% |
| bioimageio/core/utils/_compare.py |
(no function) |
4 |
0 |
0 |
100% |
| bioimageio/core/utils/_type_guards.py |
(no function) |
4 |
0 |
0 |
100% |
| bioimageio/core/weight_converters/__init__.py |
(no function) |
2 |
0 |
0 |
100% |
| bioimageio/core/weight_converters/_add_weights.py |
add_weights |
74 |
54 |
0 |
27% |
| bioimageio/core/weight_converters/_add_weights.py |
(no function) |
8 |
0 |
0 |
100% |
| bioimageio/core/weight_converters/_utils_onnx.py |
get_dynamic_axes |
6 |
0 |
0 |
100% |
| bioimageio/core/weight_converters/_utils_onnx.py |
(no function) |
5 |
0 |
0 |
100% |
| bioimageio/core/weight_converters/keras_to_tensorflow.py |
convert |
22 |
22 |
0 |
0% |
| bioimageio/core/weight_converters/keras_to_tensorflow.py |
_convert_tf2 |
5 |
5 |
0 |
0% |
| bioimageio/core/weight_converters/keras_to_tensorflow.py |
_convert_tf1 |
5 |
5 |
0 |
0% |
| bioimageio/core/weight_converters/keras_to_tensorflow.py |
_convert_tf1.build_tf_model |
6 |
6 |
0 |
0% |
| bioimageio/core/weight_converters/keras_to_tensorflow.py |
_zip_model_bundle |
11 |
11 |
0 |
0% |
| bioimageio/core/weight_converters/keras_to_tensorflow.py |
(no function) |
21 |
21 |
0 |
0% |
| bioimageio/core/weight_converters/pytorch_to_onnx.py |
convert |
15 |
1 |
0 |
93% |
| bioimageio/core/weight_converters/pytorch_to_onnx.py |
(no function) |
9 |
0 |
0 |
100% |
| bioimageio/core/weight_converters/pytorch_to_torchscript.py |
convert |
11 |
1 |
0 |
91% |
| bioimageio/core/weight_converters/pytorch_to_torchscript.py |
(no function) |
9 |
0 |
0 |
100% |
| bioimageio/core/weight_converters/torchscript_to_onnx.py |
convert |
18 |
18 |
0 |
0% |
| bioimageio/core/weight_converters/torchscript_to_onnx.py |
(no function) |
8 |
8 |
0 |
0% |